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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs553032 chr22:27667767 A/G SRRD chr22:26879843-26890624:+ 1.67 5.35 2.02E-6 Box Plot
ACC rs553032 chr22:27667767 A/G TFIP11 chr22:26887191-26908471:- 1.2 5.67 6.32E-7 Box Plot
ACC rs55665690 chr7:72229301 A/C TYW1B chr7:72023729-72298777:- 1.24 8.3 4.23E-11 Box Plot
ACC rs556935 chr1:245204100 G/T EFCAB2 chr1:245133007-245290466:+ 0.69 5.87 3.09E-7 Box Plot
ACC rs55748277 chr19:52888245 A/G ZNF880 chr19:52873170-52889048:+ 0.81 7.16 2.79E-9 Box Plot
ACC rs55761420 chr4:141808674 C/T IL15 chr4:142557752-142655140:+ 0.91 5.09 5.03E-6 Box Plot
ACC rs55762719 chr7:64542177 G/A INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs55814327 chr19:49988423 CTCAAGTGT/C PTOV1 chr19:50353992-50364001:+ 0.61 5.07 5.35E-6 Box Plot
ACC rs55893003 chr19:49988419 C/A PTOV1 chr19:50353992-50364001:+ 0.61 5.07 5.35E-6 Box Plot
ACC rs55931045 chr7:72202902 T/A TYW1B chr7:72023729-72298777:- 1.27 9.01 3.36E-12 Box Plot
ACC rs55952373 chr1:245202653 A/ATGCCT EFCAB2 chr1:245133007-245290466:+ 0.69 6.24 8.01E-8 Box Plot
ACC rs55959098 chr7:64447463 T/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs55967024 chr7:72203887 T/A TYW1B chr7:72023729-72298777:- 1.26 8.83 6.43E-12 Box Plot
ACC rs56043721 chr8:71630427 A/T XKR9 chr8:71581600-71702606:+ 0.72 6.83 9.23E-9 Box Plot
ACC rs56090355 chr19:15119897 G/A TECR chr19:14627897-14676792:+ 0.53 5.06 5.59E-6 Box Plot